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MAINT: Rename sample-peds, feature-peds, pprs and peds-simulation #111

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merged 36 commits into from
Nov 13, 2024

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cherman2
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sample-peds -> pedf
feature-peds -> prdf
pprs -> pprf
peds-simulation -> peds-permutation-test

@lizgehret
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ok so just making sure i understand - you're also removing the original peds method since you've fully replaced this functionality with pedf and prdf, correct?

@cherman2
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Yep! I don't have multiple 'peds' methods anymore so a pipeline that can run multiple peds methods felt weird so I decided to remove it in favor of pedf and prdf.

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cherman2 and others added 24 commits November 13, 2024 12:07
Co-authored-by: Liz Gehret <[email protected]>
Co-authored-by: Liz Gehret <[email protected]>
Co-authored-by: Liz Gehret <[email protected]>
Co-authored-by: Liz Gehret <[email protected]>
Co-authored-by: Liz Gehret <[email protected]>
Co-authored-by: Liz Gehret <[email protected]>
Co-authored-by: Liz Gehret <[email protected]>
@cherman2
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Thanks for the review.

I have addressed your suggestions and also I changed the description of detect-donor-indicators to be detect donor indicator features. Thanks for catching that as well.

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ok this looks great @cherman2 - i just found 3 more lil easter eggs, but this is ready to merge after that!

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@lizgehret lizgehret merged commit 40510cf into qiime2:dev Nov 13, 2024
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@lizgehret lizgehret deleted the finishing-touches branch November 13, 2024 22:57
@lizgehret lizgehret assigned cherman2 and unassigned lizgehret Nov 13, 2024
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2 participants